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Map Terms to Terms of Specified Namespace

pyobo_map.Rd

Map term to terms of a specified namespace (e.g. "DOID") using PyOBO (and by dependency other biopragmatics and INDRA labs programs; e.g. GILDA, bioregistry). In INDRA labs terminology, GILDA grounds (predicts matches of) term to namespace terms.

Usage

pyobo_map(terms, namespace)

Arguments

terms

Term(s) to map, as a character vector.

namespace

Namespace to map terms to (according to bioregistry), as a string.

Value

List of results for each term. See parse_mapping() and dependencies for details on format of results.