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Convert CURIE to URI

to_uri.Rd

Converts CURIE(s) to URI(s). Angle brackets will not be added.

Usage

to_uri(x)

Arguments

x

CURIE(s), as a character vector.

Note

Performs no CURIE validation but relies on a properly formatted CURIE for conversion (e.g. prefix:reference, according to the CURIE standard). Any inputs not matching a prefix of ns_prefix will be returned without modification.

See also

Other identifier converters: to_curie()

Examples

.curie <- c("rdfs:comment", "dc:date", "terms:license", "owl:deprecated",
            "oboInOwl:id", "UBERON:0000002", "DOID:0001816",
            "doid:DO_AGR_slim")
to_uri(.curie)
#> [1] "http://www.w3.org/2000/01/rdf-schema#comment"   
#> [2] "http://purl.org/dc/elements/1.1/date"           
#> [3] "http://purl.org/dc/terms/license"               
#> [4] "http://www.w3.org/2002/07/owl#deprecated"       
#> [5] "http://www.geneontology.org/formats/oboInOwl#id"
#> [6] "http://purl.obolibrary.org/obo/UBERON_0000002"  
#> [7] "http://purl.obolibrary.org/obo/DOID_0001816"    
#> [8] "http://purl.obolibrary.org/obo/doid#DO_AGR_slim"

#returns non-CURIE or unknown namespace prefixes unmodified
to_curie(c("SYMP:0000000", "not a CURIE", "bioregistry.collection:0000001"))
#> [1] "SYMP:0000000"                   "not a CURIE"                   
#> [3] "bioregistry.collection:0000001"